Muhleip A, Kock Flygaard R, Ovciarikova J, Lacombe A, Fernandes P, Sheiner L, Amunts A
Nat Commun (2021) 12 pp. 120-120 [ DOI: doi:10.1038/s41467-020-20381-z Pubmed: 33402698 ]
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, membrane region map
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 6tmg
Q-score: 0.589
Muhleip A, Kock Flygaard R, Ovciarikova J, Lacombe A, Fernandes P, Sheiner L, Amunts A
Nat Commun (2021) 12 pp. 120-120 [ DOI: doi:10.1038/s41467-020-20381-z Pubmed: 33402698 ]
- Subunit b (64 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg5 (28 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg11 (15 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Dodecyl-beta-d-maltoside (510 Da, Ligand)
- Atptg16 (11 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg8 (23 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg4 (28 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg3 (35 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Subunit 8 (22 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- 1,2-diacyl-sn-glycero-3-phosphocholine (790 Da, Ligand)
- Atptg2 (35 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Subunit k (17 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Subunit a (24 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg10 (15 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg7 (26 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Cardiolipin (1 kDa, Ligand)
- Atptg14 (14 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg1 (46 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (749 Da, Ligand)
- Atptg9 (18 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Subunit d (61 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg12 (15 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg15 (13 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Mitochondrial atp synthase dimer, membrane region (900 kDa, Complex from Toxoplasma gondii GT1)
- Atptg6 (27 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Subunit i/j (26 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg13 (14 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Subunit f (13 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg17 (9 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, OSCP/F1/c-ring map
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6tmh
Q-score: 0.534
Muhleip A, Kock Flygaard R, Ovciarikova J, Lacombe A, Fernandes P, Sheiner L, Amunts A
Nat Commun (2021) 12 pp. 120-120 [ DOI: doi:10.1038/s41467-020-20381-z Pubmed: 33402698 ]
- Mitochondrial atp synthase dimer, oscp/f1/c-ring model (460 kDa, Complex from Toxoplasma gondii GT1)
- Atp synthase subunit alpha,subunit alpha (61 kDa, Protein from Toxoplasma gondii GT1)
- Atp synthase subunit delta (19 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Atp synthase subunit beta (59 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Magnesium ion (24 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Oligomycin sensitivity conferring protein (oscp) (27 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Subunit c (17 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Inhibitor of f1 (16 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atp synthase subunit gamma (34 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atp synthase subunit epsilon (8 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, peripheral stalk map
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 6tmi
Q-score: 0.381
Muhleip A, Kock Flygaard R, Ovciarikova J, Lacombe A, Fernandes P, Sheiner L, Amunts A
Nat Commun (2021) 12 pp. 120-120 [ DOI: doi:10.1038/s41467-020-20381-z Pubmed: 33402698 ]
- Atptg12 (15 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Subunit b (64 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atp synthase subunit alpha (61 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Oligomycin sensitivity conferring protein (oscp) (27 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Mitochondrial atp synthase dimer, peripheral stalk (68 kDa, Complex from Toxoplasma gondii GT1)
- Subunit d (61 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, rotor-stator map
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 6tmj
Q-score: 0.473
Muhleip A, Kock Flygaard R, Ovciarikova J, Lacombe A, Fernandes P, Sheiner L, Amunts A
Nat Commun (2021) 12 pp. 120-120 [ DOI: doi:10.1038/s41467-020-20381-z Pubmed: 33402698 ]
- Mitochondrial atp synthase dimer, rotor-stator (127 kDa, Complex from Toxoplasma gondii GT1)
- Atp synthase subunit delta (19 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg11 (15 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atp synthase subunit epsilon (8 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Subunit c (17 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atp synthase subunit gamma (34 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Subunit a (24 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, consensus map
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 6tmk
Q-score: 0.428
Muhleip A, Kock Flygaard R, Ovciarikova J, Lacombe A, Fernandes P, Sheiner L, Amunts A
Nat Commun (2021) 12 pp. 120-120 [ DOI: doi:10.1038/s41467-020-20381-z Pubmed: 33402698 ]
- Subunit b (64 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg5 (28 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg11 (15 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Dodecyl-beta-d-maltoside (510 Da, Ligand)
- Subunit c (17 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg16 (11 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg8 (23 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atp synthase subunit epsilon (8 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg4 (28 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg3 (35 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Subunit 8 (22 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- 1,2-diacyl-sn-glycero-3-phosphocholine (790 Da, Ligand)
- Atp synthase subunit delta (19 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg2 (35 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atp synthase subunit beta (59 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Subunit k (17 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Oligomycin sensitivity conferring protein (oscp) (27 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Inhibitor of f1 (16 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Subunit a (24 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg10 (15 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg7 (26 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atp synthase subunit alpha,subunit alpha (61 kDa, Protein from Toxoplasma gondii GT1)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Cardiolipin (1 kDa, Ligand)
- Atptg14 (14 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg1 (46 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atp synthase subunit gamma (34 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (749 Da, Ligand)
- Atptg9 (18 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg17 (9 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Subunit d (61 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg12 (15 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg15 (13 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg6 (27 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Subunit i/j (26 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg13 (14 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Subunit f (13 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Mitochondrial atp synthase dimer, composite model (1 MDa, Complex from Toxoplasma gondii GT1)
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase hexamer, membrane region
Resolution: 4.8 Å
EM Method: Single-particle
Fitted PDBs: 6tml
Q-score: 0.153
Muhleip A, Kock Flygaard R, Ovciarikova J, Lacombe A, Fernandes P, Sheiner L, Amunts A
Nat Commun (2021) 12 pp. 120-120 [ DOI: doi:10.1038/s41467-020-20381-z Pubmed: 33402698 ]
- Subunit b (64 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg5 (28 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg11 (15 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Subunit c (17 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg16 (11 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg8 (23 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atp synthase subunit epsilon (8 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg4 (28 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg3 (35 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Subunit 8 (22 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atp synthase subunit delta (19 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atp synthase subunit alpha (61 kDa, Protein from Toxoplasma gondii GT1)
- Atptg2 (35 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atp synthase subunit beta (59 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Toxoplasma gondii atp synthase hexamer (5 MDa, Complex from Toxoplasma gondii GT1)
- Subunit k (17 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Oligomycin sensitivity conferring protein (oscp) (27 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Inhibitor of f1 (16 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Subunit a (24 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg10 (15 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg7 (26 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg17,atptg17,atptg17 (9 kDa, Protein from Toxoplasma gondii GT1)
- Atptg14 (14 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg1 (46 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atp synthase subunit gamma (34 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg9 (18 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Subunit d (61 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg12 (15 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg15 (13 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg6 (27 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Subunit i/j (26 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Atptg13 (14 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
- Subunit f (13 kDa, Protein from Toxoplasma gondii (strain ATCC 50853 / GT1))
Subtomogram average of ATP synthase dimer from Toxoplasma gondii mitochondrial membranes
Muhleip A, Kock Flygaard R, Ovciarikova J, Lacombe A, Fernandes P, Sheiner L, Amunts A
Nat Commun (2021) 12 pp. 120-120 [ DOI: doi:10.1038/s41467-020-20381-z Pubmed: 33402698 ]
Subtomogram average of the ATP synthase dimer from Toxoplasma gondii mitochondria
Muhleip A, Kock Flygaard R, Ovciarikova J, Lacombe A, Fernandes P, Sheiner L, Amunts A
Nat Commun (2021) 12 pp. 120-120 [ DOI: doi:10.1038/s41467-020-20381-z Pubmed: 33402698 ]